Berkeley imaging analysis clinic¶
Contents:
- Where and when?
- Clinics to date
- Temporal derivative and slice timing
- Thinking about power in neuroimaging analyses
- Evaluation of the statistical model
- Correlated regressors, power
- Within-subject registration and fieldmaps
- Fieldmaps extravaganza
- Optimizing designs, orthogonalizing regressors
- Multiple comparison correction, non-parametric methods
- On choosing a connectivity metric
- Spatial normalization
- Assessing normalization methods
- Seminar on diffusion imaging analysis
- Hands-on normalization with ANTS
- Journal club on FMRI noise and FMRI networks
- Journal club on false positives in FMRI
- Effect of movement and spatial preprocessing on functional SNR
- Journal club on detection of motion in FMRI
- Journal club on reproducibility
- Discussion of model validation
- Using components of CSF signal for denoising FMRI
- Journal club on denoising regression models in FMRI
- OpenFMRI data format
- Journal club on reliability in functional connectivity
- Journal club in characterizing motion artefacts
- Discussion of ROI voxel selection
- Removing noise with constrained regression
- Discussion of brainspell activation database
- Permutation inference for the GLM
- Idiot’s guide to tractography
- How good is tractography?
- Parametric inference methods for group studies
- Reproducibility of psychological science
- Discussion of anatomical and functional connectivity
- Introduction to Fourier analysis
- Constrained regression for removing outlier scans in FMRI
- Node selection and graph community detection
- A format for describing and sharing FMRI data
- Replication of brian-behavior correlations
- Introduction to nipy
- Topics proposed for future clinics