Day eleven : 10 May 2013

Introduction

1. Workflow
   1. Organizing code and notebooks
   2. Using version control
   3. Building pipelines
   4. Reproducible analysis scripts
2. Registration
   1. Principles
   2. Motion correction

Notebooks for class

• workflow for class, raw notebook file for downloading.
• workflow for class, web notebook presented nicely as a web page.
• Nipy registration intro for class, raw notebook file for downloading.
• Nipy registration intro for class, web notebook presented nicely as a web page.
• Registration intro for class, raw notebook file for downloading.
• Registration intro for class, web notebook presented nicely as a web page.
• git introduction intro for class, raw notebook file for downloading.
• git introduction intro for class, web notebook presented nicely as a web page.

Full notebooks with answers

• Registration intro with answers, raw notebook file for downloading.
• Registration intro with answers, web notebook presented nicely as a web page.

Background

• A nice but technical technical report on the components and issues in image registration.